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Gene Symbol |
GATA4 |
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Aliases |
ASD2, TACHD, TOF, VSD1 |
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Entrez Gene ID |
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Gene Name |
GATA binding protein 4 |
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Chromosomal Location |
8p23.1 |
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HGNC ID |
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Summary |
This gene encodes a member of the GATA family of zinc-finger transcription factors. Members of this family recognize the GATA motif which is present in the promoters of many genes. This protein is thought to regulate genes involved in embryogenesis and in myocardial differentiation and function, and is necessary for normal testicular development. Mutations in this gene have been associated with cardiac septal defects. Additionally, alterations in gene expression have been associated with several cancer types. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2015]
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RefSeq DNA |
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RefSeq mRNA |
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e!Ensembl
Gene |
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Transcript |
ENST00000528712, ENST00000532977, ENST00000526974, ENST00000526716, ENST00000335135, ENST00000528027, ENST00000532059, ENST00000622443, ENST00000647274, ENST00000646696, ENST00000645330, ENST00000643249, ENST00000642612, ENST00000646425, ENST00000644275, ENST00000642753 |
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Protein |
ENSP00000435043, ENSP00000473671, ENSP00000473598, ENSP00000435347, ENSP00000334458, ENSP00000432278, ENSP00000435712, ENSP00000482268, ENSP00000495511, ENSP00000494491, ENSP00000496486, ENSP00000493647, ENSP00000496386, ENSP00000494090, ENSP00000496575, ENSP00000494427
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Gene Ontology (GO)
GO ID |
Ontology |
Function |
Evidence |
Reference |
GO:0003180 |
Biological process |
Aortic valve morphogenesis |
IMP |
29325903 |
GO:0003197 |
Biological process |
Endocardial cushion development |
IMP |
21330551 |
GO:0003208 |
Biological process |
Cardiac ventricle morphogenesis |
TAS |
20347099 |
GO:0003290 |
Biological process |
Atrial septum secundum morphogenesis |
IMP |
20347099 |
GO:0007492 |
Biological process |
Endoderm development |
TAS |
20347099 |
GO:0008584 |
Biological process |
Male gonad development |
IEP |
17848411 |
GO:0008584 |
Biological process |
Male gonad development |
IMP |
21220346 |
GO:0042493 |
Biological process |
Response to drug |
IMP |
20585342 |
GO:0045893 |
Biological process |
Positive regulation of transcription, DNA-templated |
IDA |
24000169 |
GO:0045944 |
Biological process |
Positive regulation of transcription by RNA polymerase II |
IDA |
21330551, 29325903 |
GO:0045944 |
Biological process |
Positive regulation of transcription by RNA polymerase II |
ISS |
12845333 |
GO:0048738 |
Biological process |
Cardiac muscle tissue development |
IBA |
21873635 |
GO:0060413 |
Biological process |
Atrial septum morphogenesis |
IMP |
12845333 |
GO:0060575 |
Biological process |
Intestinal epithelial cell differentiation |
IDA |
9566909 |
GO:0005634 |
Cellular component |
Nucleus |
IBA |
21873635 |
GO:0005634 |
Cellular component |
Nucleus |
IDA |
9566909, 21220346, 24000169 |
GO:0005634 |
Cellular component |
Nucleus |
NAS |
12845333 |
GO:0090575 |
Cellular component |
RNA polymerase II transcription factor complex |
IDA |
9312027 |
GO:0000977 |
Molecular function |
RNA polymerase II regulatory region sequence-specific DNA binding |
IGI |
21330551 |
GO:0000978 |
Molecular function |
RNA polymerase II proximal promoter sequence-specific DNA binding |
IBA |
21873635 |
GO:0000981 |
Molecular function |
DNA-binding transcription factor activity, RNA polymerase II-specific |
IBA |
21873635 |
GO:0000981 |
Molecular function |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ISM |
19274049 |
GO:0000981 |
Molecular function |
DNA-binding transcription factor activity, RNA polymerase II-specific |
NAS |
19274049 |
GO:0001085 |
Molecular function |
RNA polymerase II transcription factor binding |
IPI |
21330551 |
GO:0001228 |
Molecular function |
DNA-binding transcription activator activity, RNA polymerase II-specific |
IGI |
21330551 |
GO:0003677 |
Molecular function |
DNA binding |
IDA |
24000169 |
GO:0003700 |
Molecular function |
DNA-binding transcription factor activity |
IDA |
9312027 |
GO:0003713 |
Molecular function |
Transcription coactivator activity |
IDA |
21220346 |
GO:0005515 |
Molecular function |
Protein binding |
IPI |
9312027, 12845333, 15485867, 16199874, 17053787, 21220346, 24000169 |
GO:0008134 |
Molecular function |
Transcription factor binding |
IPI |
9858576 |
GO:0044212 |
Molecular function |
Transcription regulatory region DNA binding |
IDA |
9566909, 21220346 |
GO:0070410 |
Molecular function |
Co-SMAD binding |
IPI |
21330551 |
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Protein Information |
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Protein Name |
Transcription factor GATA-4, GATA-binding factor 4 |
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Function |
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UniProt |
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PDB |
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Interactions |
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STRING |
MINT |
IntAct |
ENSP00000381607 |
P09211 |
P09211 |
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View interactions
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Associated Diseases
Disease group | Disease Name | References |
Cardiovascular Diseases |
Ventricular Septal Defect |
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Atrial septal defect |
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Myocardial Infarction |
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Congenital, Hereditary, and Neonatal Diseases and Abnormalities |
Tetralogy of Fallot |
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Congenital diaphragmatic hernia |
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Congenital heart disease |
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Endocrine System Diseases |
Disorders of Sex Development |
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PCOS |
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Neoplasms |
Colorectal Cancer |
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Genital Neoplasms, Male |
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Reproductive disorders |
Testicular Anomalies |
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References |
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Dunaif Andrea |
Division of Endocrinology, Metabolism, and Molecular Medicine, Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611. |
J Clin Endocrinol Metab. 2016 Mar;101(3):759-68. doi: 10.1210/jc.2015-3780. Epub |
Abstract
CONTEXT: Polycystic ovary syndrome (PCOS) is a common complex genetic disease. It is characterized by hyperandrogenism, gonadotropin secretory changes, polycystic ovarian morphology, and insulin resistance. The etiology of PCOS remains unknown, but modern genetic approaches, such as genome-wide association studies (GWAS), Mendelian randomization, and next-generation sequencing, promise to identify the pathways that are primarily disrupted. EVIDENCE ACQUISITION: The literature on PCOS, including the author's research, is discussed. EVIDENCE SYNTHESIS: Recent genetic analyses are reviewed. CONCLUSIONS: Considerable progress has been made mapping PCOS susceptibility genes. GWAS have implicated gonadotropin secretion and action as important primary defects in disease pathogenesis in European and Han Chinese PCOS cohorts, respectively. European women with the National Institutes of Health and Rotterdam phenotypes as well as those with self-reported PCOS have some gene regions in common, such as chromosome 11p14.1 region containing the FSH B polypeptide (FSHB) gene, suggesting shared genetic susceptibility. Several chromosomal signals are significant in both Han Chinese and European PCOS cohorts, suggesting that the susceptibility genes in these regions are evolutionarily conserved. In addition, GWAS have suggested that DENND1A, epidermal growth factor signaling, and DNA repair pathways play a role in PCOS pathogenesis. Only a small amount of the heritability of PCOS is accounted for by the common susceptibility variants mapped so far. Future studies should clarify the contribution of rare genetic variants and epigenetic factors to the PCOS phenotype. Furthermore, Mendelian randomization can be used to clarify causal relationships, and phenome-wide association studies can provide insight into health risks associated with PCOS susceptibility variants. |
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