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Gene Symbol |
MIR146A |
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Aliases |
MIRN146, MIRN146A, miR-146a, miRNA146A |
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Entrez Gene ID |
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Gene Name |
MicroRNA 146a |
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Chromosomal Location |
5q33.3 |
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HGNC ID |
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Summary |
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. Some of the targets of the encoded miRNA are the transcripts for tumor necrosis factor, interleukin 1 receptor-associated kinase 1, interleukin 1-beta, TNF receptor-associated factor 6, and complement factor H. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2015]
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SNPs
SNP Id |
Upstream Sequence |
SNP |
Downstream Sequence |
Functional Significance |
References |
rs2910164 |
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29037553 | |
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Gene Ontology (GO)
GO ID |
Ontology |
Function |
Evidence |
Reference |
GO:0001937 |
Biological process |
Negative regulation of endothelial cell proliferation |
IDA |
23619365 |
GO:0010628 |
Biological process |
Positive regulation of gene expression |
IDA |
27121396, 29384235 |
GO:0010629 |
Biological process |
Negative regulation of gene expression |
IDA |
29384235 |
GO:0016525 |
Biological process |
Negative regulation of angiogenesis |
IMP |
23619365 |
GO:0032715 |
Biological process |
Negative regulation of interleukin-6 production |
IDA |
28433754 |
GO:0034121 |
Biological process |
Regulation of toll-like receptor signaling pathway |
IDA |
16885212 |
GO:0035195 |
Biological process |
Gene silencing by miRNA |
IDA |
16885212, 20181935, 23619365, 24863965, 25515214, 27121396, 28727754 |
GO:0035195 |
Biological process |
Gene silencing by miRNA |
IMP |
18801740, 20937840 |
GO:0038061 |
Biological process |
NIK/NF-kappaB signaling |
IMP |
20937840 |
GO:0042532 |
Biological process |
Negative regulation of tyrosine phosphorylation of STAT protein |
IDA |
28433754 |
GO:0045666 |
Biological process |
Positive regulation of neuron differentiation |
IC |
29384235 |
GO:0045743 |
Biological process |
Positive regulation of fibroblast growth factor receptor signaling pathway |
IDA |
27121396 |
GO:0060253 |
Biological process |
Negative regulation of glial cell proliferation |
IDA |
29384235 |
GO:0070498 |
Biological process |
Interleukin-1-mediated signaling pathway |
IMP |
20937840 |
GO:0071222 |
Biological process |
Cellular response to lipopolysaccharide |
IDA |
16885212 |
GO:0071333 |
Biological process |
Cellular response to glucose stimulus |
IDA |
28433754 |
GO:0071345 |
Biological process |
Cellular response to cytokine stimulus |
IDA |
25515214 |
GO:0071456 |
Biological process |
Cellular response to hypoxia |
IMP |
18801740 |
GO:0090050 |
Biological process |
Positive regulation of cell migration involved in sprouting angiogenesis |
IDA |
27121396 |
GO:0090050 |
Biological process |
Positive regulation of cell migration involved in sprouting angiogenesis |
IMP |
24863965 |
GO:0090051 |
Biological process |
Negative regulation of cell migration involved in sprouting angiogenesis |
IMP |
28727754 |
GO:0098586 |
Biological process |
Cellular response to virus |
IDA |
20181935 |
GO:1901223 |
Biological process |
Negative regulation of NIK/NF-kappaB signaling |
IDA |
25515214 |
GO:1902511 |
Biological process |
Negative regulation of apoptotic DNA fragmentation |
IDA |
28433754 |
GO:1903589 |
Biological process |
Positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis |
IDA |
27121396 |
GO:1904046 |
Biological process |
Negative regulation of vascular endothelial growth factor production |
IDA |
28433754 |
GO:1904646 |
Biological process |
Cellular response to amyloid-beta |
IMP |
20937840 |
GO:1904995 |
Biological process |
Negative regulation of leukocyte adhesion to vascular endothelial cell |
IDA |
25515214 |
GO:2000736 |
Biological process |
Regulation of stem cell differentiation |
IDA |
29384235 |
GO:0005615 |
Cellular component |
Extracellular space |
HDA |
18766170 |
GO:0005615 |
Cellular component |
Extracellular space |
IDA |
26646931 |
GO:0070062 |
Cellular component |
Extracellular exosome |
IDA |
23619365 |
GO:1903231 |
Molecular function |
MRNA binding involved in posttranscriptional gene silencing |
IDA |
16885212, 20181935, 23619365, 25515214, 27121396, 28727754 |
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Associated Diseases
Disease group | Disease Name | References |
Cardiovascular Diseases |
Arteriosclerosis |
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Endocrine System Diseases |
PCOS |
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Neoplasms |
Carcinoid Tumor |
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Breast Cancer |
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Carcinoma |
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Lung Cancer |
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Argentaffinoma |
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Psychiatric/Brain disorders |
Senile Dementia |
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Alzheimer Disease |
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Reproductive disorders |
Preeclampsia |
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References |
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PubMed ID |
Associated gene/s |
Associated condition |
Genetic Mutation |
Diagnostic Criteria |
Association with PCOS |
Ethnicity |
Conclusion |
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FBN3, HSD17B6, CAPN, miR-30c, miR-222, |
PCOS, persistently rapid gonadotropinreleasing hormone pulses, an excess of luteinizing hormone and insufficient follicle-stimulating hormone (FSH) secretion, excessive ovarian androgen production, ovulatory dysfunction,infertility, obesity, hypertension, |
rs2910164 |
National Institute of Health criteiria |
Related
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180 PCOS women and 192 control women |
Women with miR-146a variation are at a higher risk for developing PCOS, which can be due to up-regulation of miR-146a. |
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MIR222 |
PCOS, chronic anovulation, polycystic ovary, and hyperandrogenism |
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Rotterdam ESHRE/ASRM-Sponsored PCOS Consensus Workshop Group |
Related
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205 PCOS women and 205 control women from Shiraz Fertility Centre, Iran |
miR-146a rs2910164 and miR-222 rs2858060 polymorphisms are associated with an increased risk of PCOS. Therefore, both polymorphisms could play animportant role as a genetic risk factor for development of PCOS in the Iranian population. |
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