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Gene Symbol |
SGTA |
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Aliases |
SGT, alphaSGT, hSGT |
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Entrez Gene ID |
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Gene Name |
Small glutamine rich tetratricopeptide repeat containing alpha |
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Chromosomal Location |
19p13.3 |
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HGNC ID |
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Summary |
This gene encodes a protein which is capable of interacting with the major nonstructural protein of parvovirus H-1 and 70-kDa heat shock cognate protein; however, its function is not known. Since this transcript is expressed ubiquitously in various tissues, this protein may serve a housekeeping function. [provided by RefSeq, Jul 2008]
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e!Ensembl
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SNPs
SNP Id |
Upstream Sequence |
SNP |
Downstream Sequence |
Functional Significance |
References |
rs1640262 |
TTGTGGGACTTCAGAAGAGAGAAAGA |
C/T |
GTGGGCTGGACATCAAAGAAGGCCT |
Intron variant |
18332089 | |
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Gene Ontology (GO)
GO ID |
Ontology |
Function |
Evidence |
Reference |
GO:0006620 |
Biological process |
Posttranslational protein targeting to endoplasmic reticulum membrane |
IBA |
21873635 |
GO:0030433 |
Biological process |
Ubiquitin-dependent ERAD pathway |
IBA |
21873635 |
GO:0030433 |
Biological process |
Ubiquitin-dependent ERAD pathway |
IDA |
23129660 |
GO:0071816 |
Biological process |
Tail-anchored membrane protein insertion into ER membrane |
IDA |
25535373 |
GO:1903070 |
Biological process |
Negative regulation of ER-associated ubiquitin-dependent protein catabolic process |
IDA |
23129660 |
GO:1903071 |
Biological process |
Positive regulation of ER-associated ubiquitin-dependent protein catabolic process |
IMP |
23246001 |
GO:1903646 |
Biological process |
Positive regulation of chaperone-mediated protein folding |
IBA |
21873635 |
GO:2000059 |
Biological process |
Negative regulation of ubiquitin-dependent protein catabolic process |
IDA |
23129660 |
GO:0005634 |
Cellular component |
Nucleus |
IDA |
16580629 |
GO:0005737 |
Cellular component |
Cytoplasm |
IDA |
16580629 |
GO:0005829 |
Cellular component |
Cytosol |
IBA |
21873635 |
GO:0005829 |
Cellular component |
Cytosol |
IDA |
23246001 |
GO:0016020 |
Cellular component |
Membrane |
IBA |
21873635 |
GO:0016020 |
Cellular component |
Membrane |
IDA |
23246001 |
GO:0072380 |
Cellular component |
TRC complex |
IBA |
21873635 |
GO:0005515 |
Molecular function |
Protein binding |
IPI |
14667819, 15708368, 16189514, 16580629, 19615732, 21516116, 21988832, 23246001, 25036637, 25416956, 25910212, 26871637, 27107012 |
GO:0042802 |
Molecular function |
Identical protein binding |
IPI |
25036637 |
GO:0043621 |
Molecular function |
Protein self-association |
IDA |
15708368 |
GO:1904288 |
Molecular function |
BAT3 complex binding |
IPI |
23246001 |
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Protein Information |
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Protein Name |
Small glutamine-rich tetratricopeptide repeat-containing protein alpha, UBP, alpha-SGT, protein containing three tetratricopeptide repeats, small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, vpu-binding protein |
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Function |
Co-chaperone that binds misfolded and hydrophobic patches-containing client proteins in the cytosol. Mediates their targeting to the endoplasmic reticulum but also regulates their sorting to the proteasome when targeting fails (PubMed:28104892). Functions in tail-anchored/type II transmembrane proteins membrane insertion constituting with ASNA1 and the BAG6 complex a targeting module (PubMed:28104892). Functions upstream of the BAG6 complex and ASNA1, binding more rapidly the transmembrane domain of newly synthesized proteins (PubMed:28104892, PubMed:25535373). It is also involved in the regulation of the endoplasmic reticulum-associated misfolded protein catabolic process via its interaction with BAG6: collaborates with the BAG6 complex to maintain hydrophobic substrates in non-ubiquitinated states (PubMed:23129660, PubMed:25179605). Competes with RNF126 for interaction with BAG6, preventing the ubiquitination of client proteins associated with the BAG6 complex (PubMed:27193484). Binds directly to HSC70 and HSP70 and regulates their ATPase activity (PubMed:18759457). .; (Microbial infection) In case of infection by polyomavirus, involved in the virus endoplasmic reticulum membrane penetration and infection via interaction with DNAJB12, DNAJB14 and HSPA8/Hsc70 (PubMed:24675744). |
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UniProt |
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PDB |
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Interactions |
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STRING |
MINT |
IntAct |
ENSP00000301522 |
P32119 |
P32119 |
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View interactions
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Associated Diseases
Disease group | Disease Name | References |
Endocrine System Diseases |
PCOS |
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Neoplasms |
Ovarian Cancer |
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Esophagus Neoplasm |
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Prostate cancer |
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Prostate Carcinoma |
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References |
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PubMed ID |
Associated gene/s |
Associated condition |
Genetic Mutation |
Diagnostic Criteria |
Association with PCOS |
Ethnicity |
Conclusion |
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Insulin resistance |
SNP rs1640262,haplotype 1 (G-A-T),haplotype 2 (A-G-C) |
NIH criteria |
Related
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This study presents genetic evidence suggesting a potential role of SGTA in the pathogenesis of PCOS. SGTA may provide a connection between multiple pathways in PCOS. |
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FBN3,ACVR2A, POMC and FEM1B |
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Elevation of circulating androgen levels, either testosterone (T) or nonsex hormone-binding globulin-bound testosterone (uT) associated with chronic oligomenorrhea (6 menses per year) or amenorrhea |
Related
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A polymorphic variant, D19S884, in FBN3 is associated with risk of PCOS. POMC is also a candidate gene of interest. SGTA was found to be nominally significant |
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